STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce0776Hypothetical protein predicted by Glimmer/Critica. (286 aa)    
Predicted Functional Partners:
sce4190
Uncharacterized protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
  
 0.886
sce1730
Hypothetical protein; Family membership.
  
  
 0.857
sce4846
Uncharacterized protein conserved in bacteria.
  
  
 0.794
sce0777
CheA-like hybrid histidine kinase; Family membership.
  
  
 0.790
sce2131
Hypothetical protein predicted by Glimmer/Critica.
  
     0.691
sce4309
Hybrid sensory histidine kinase; Family membership.
  
  
 0.667
sce7807
Histidine kinase; Unnamed protein product; Family membership.
  
  
 0.608
sce5014
RNA polymerase sigma factor; Family membership; Belongs to the sigma-70 factor family.
 
  
 0.600
sce3131
Hypothetical protein predicted by Glimmer/Critica.
  
 
 0.594
sce1396
CheA-like histidine kinase; Family membership.
  
  
 0.564
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.