STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce0803Chemotaxis protein CheY; Specificity unclear. (125 aa)    
Predicted Functional Partners:
cheA1
Chemotaxis protein cheA; High confidence in function and specificity.
 
 0.941
mcp
Putative methyl-accepting chemotaxis protein.
  
 0.905
sce1228
Probable chemotaxis transducer.
 
  0.903
cheW2
Purine-binding chemotaxis protein CheW.
 
 
 0.892
cheW5
Chemotaxis protein.
 
 
 0.886
cheA2
Chemotaxis protein CheA.
 
 0.878
cheW4
CheW4 protein; Family membership.
 
 
 0.871
cheA4
Putative chemotaxis protein CheA.
 
 0.869
cheW3
Purine-binding chemotaxis protein CheW; Family membership.
 
 
 0.858
cheA3
Chemotaxis sensor histidine kinase CheA; High confidence in function and specificity.
 
 0.854
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.