STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce0876Hypothetical protein predicted by Glimmer/Critica. (590 aa)    
Predicted Functional Partners:
sce7776
Two-component hybrid histidine kinase; Family membership.
 
  
 0.837
sce1346
Hybrid histidine kinase; Family membership.
 
  
 0.834
sce0880
Putative anti-sigma factor antagonist; Specificity unclear; Belongs to the anti-sigma-factor antagonist family.
 
   0.762
sce0881
Anti-sigma factor; Specificity unclear.
 
 
 0.735
sce7775
Response regulatory domain-containing protein; Unnamed protein product; Family membership.
 
 
 0.718
sce1938
Two-component response regulator; Family membership.
 
 
 0.716
rsbR1
Positive regulator of sigma-B.
 
 
 0.707
rsbT3
Protein kinase; Specificity unclear.
 
 
 0.692
sce4309
Hybrid sensory histidine kinase; Family membership.
 
  
 0.683
sce4899
Anti-anti sigma factor protein.
 
 
 0.681
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.