STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce0932Two-component sensor histidine kinase; Family membership. (430 aa)    
Predicted Functional Partners:
sce0931
Hypothetical protein.
      0.857
sce1263
Hypothetical protein; FOG: GAF domain.
 
   0.643
sce6967
Probable two-component response regulator; Family membership.
  
 
   0.634
sce3507
Two-component hybrid sensor and regulator; Family membership.
 
 
 0.587
sce6826
Two-component hybrid sensor and regulator; Family membership.
 
0.577
sce1260
Two-component hybrid sensor and regulator; Family membership.
 
 0.564
sce3849
Response regulatory domain-containing protein; Unnamed protein product; Family membership.
  
 
   0.547
dnaZ
DNA-directed RNA polymerase.
       0.540
sce0929
Two-component hybrid sensor and regulator.
 
0.537
sce5166
Two component response regulator; Family membership.
  
 
   0.525
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.