STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce1014Putative secreted protein. (252 aa)    
Predicted Functional Partners:
sce5100
Two-component hybrid histidine kinase; Family membership.
   
 
 0.861
sce3507
Two-component hybrid sensor and regulator; Family membership.
 
 
 0.777
sce6826
Two-component hybrid sensor and regulator; Family membership.
 
 
 0.737
sce7217
Unnamed protein product; Family membership.
  
 
 0.574
sce0206
Two-component system sensor histidine kinase/response regulator, hybrid ('one-component system'); Family membership.
 
 
 0.562
sce2294
Putative secreted protein.
  
     0.539
sce1553
O-methyltransferase family protein.
  
    0.522
cyaX
Putative adenylate cyclase; Family membership; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
 
  
   0.518
sce5107
Two-component hybrid sensor and regulator; Family membership.
  
 
 0.518
sce7776
Two-component hybrid histidine kinase; Family membership.
 
 
 0.493
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.