Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce1131Predicted nucleic acid-binding protein contains PIN domain. (164 aa)    
Predicted Functional Partners:
sce5011
Hypothetical protein.
 
     0.783
sce1130
Hypothetical protein.
       0.782
sce5398
Hypothetical protein.
  
     0.746
sce4876
Hypothetical protein.
  
     0.745
sce4360
Protein of unknown function.
  
     0.725
sce7473
Hypothetical protein.
  
     0.714
sce5676
Hypothetical protein.
  
     0.711
sce3137
Hypothetical protein predicted by Glimmer/Critica.
  
     0.710
sce9331
Hypothetical protein.
  
     0.710
sce6578
Hypothetical protein.
  
     0.707
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.