Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
glpDGlpD protein; Family membership. (557 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
 0.989
glpA
Glycerol-3-phosphate dehydrogenase; Family membership; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 
0.929
glpC
GlpC protein; Family membership.
  
 
 0.927
gpsA1
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); High confidence in function and specificity; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.925
gpsA2
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); High confidence in function and specificity; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.922
gldA
Glycerol-1-phosphate dehydrogenase (NAD(P)(+)).
    
 0.920
plsB
PlsB protein; Family membership.
    
 0.918
plsY
Putative membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
     
 0.917
sce8682
Hypothetical protein predicted by Glimmer/Critica.
     
  0.900
dak2
Glycerone kinase, DAK2 domain; High confidence in function and specificity.
  
 
 0.828
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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