Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
celG | sce0966 | sce0902 | sce0966 | Cellulase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein. | 0.775 |
celG | sce1246 | sce0902 | sce1246 | Cellulase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Putative Alpha-arabinofuranosidase; Family membership. | 0.583 |
celG | sce1247 | sce0902 | sce1247 | Cellulase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein, conserved. | 0.744 |
celG | sce1955 | sce0902 | sce1955 | Cellulase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein predicted by Glimmer/Critica; Belongs to the glycosyl hydrolase 43 family. | 0.775 |
celG | sce2693 | sce0902 | sce2693 | Cellulase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Putative beta-xylosidase; Family membership. | 0.750 |
celG | sce3040 | sce0902 | sce3040 | Cellulase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein. | 0.755 |
celG | sce3118 | sce0902 | sce3118 | Cellulase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein; Putative xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. | 0.775 |
celG | sce4015 | sce0902 | sce4015 | Cellulase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein; Belongs to the glycosyl hydrolase 43 family. | 0.732 |
celG | sce8904 | sce0902 | sce8904 | Cellulase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein predicted by Glimmer/Critica; Belongs to the glycosyl hydrolase 43 family. | 0.773 |
celG | xynD | sce0902 | sce4598 | Cellulase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Endo-1,4-beta-xylanase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 43 family. | 0.775 |
sce0966 | celG | sce0966 | sce0902 | Hypothetical protein. | Cellulase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.775 |
sce0966 | sce1246 | sce0966 | sce1246 | Hypothetical protein. | Putative Alpha-arabinofuranosidase; Family membership. | 0.468 |
sce0966 | sce1247 | sce0966 | sce1247 | Hypothetical protein. | Hypothetical protein, conserved. | 0.930 |
sce0966 | sce1955 | sce0966 | sce1955 | Hypothetical protein. | Hypothetical protein predicted by Glimmer/Critica; Belongs to the glycosyl hydrolase 43 family. | 0.775 |
sce0966 | sce2693 | sce0966 | sce2693 | Hypothetical protein. | Putative beta-xylosidase; Family membership. | 0.739 |
sce0966 | sce3040 | sce0966 | sce3040 | Hypothetical protein. | Hypothetical protein. | 0.713 |
sce0966 | sce3118 | sce0966 | sce3118 | Hypothetical protein. | Hypothetical protein; Putative xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. | 0.773 |
sce0966 | sce4015 | sce0966 | sce4015 | Hypothetical protein. | Hypothetical protein; Belongs to the glycosyl hydrolase 43 family. | 0.952 |
sce0966 | sce8904 | sce0966 | sce8904 | Hypothetical protein. | Hypothetical protein predicted by Glimmer/Critica; Belongs to the glycosyl hydrolase 43 family. | 0.749 |
sce0966 | xynD | sce0966 | sce4598 | Hypothetical protein. | Endo-1,4-beta-xylanase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 43 family. | 0.775 |
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