STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wecDHypothetical protein; Histone acetyltransferase HPA2 and related acetyltransferases. (351 aa)    
Predicted Functional Partners:
sce6328
Hypothetical protein; Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.695
sce2445
Hypothetical protein predicted by Glimmer/Critica.
  
     0.680
sce7314
Hypothetical protein predicted by Glimmer/Critica.
  
    0.653
sce2057
Putative sphingosine kinase enzyme; High confidence in function and specificity.
  
     0.630
sce1268
Transcriptional regulator, GntR family; Family membership.
 
     0.621
sce5360
Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
     0.620
sce7834
Uncharacterized protein conserved in bacteria.
  
     0.614
sce2439
Hypothetical protein predicted by Glimmer/Critica.
  
     0.611
sce7031
Hypothetical protein.
  
     0.590
panE1
2-dehydropantoate 2-reductase; Family membership.
  
     0.554
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.