Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sce1306Assimilatory nitrite reductase small subunit. (596 aa)    
Predicted Functional Partners:
nirB1
Nitrite reductase; High confidence in function and specificity; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.831
hemD
Uroporphyrinogen-III synthase; Family membership.
  
  
 0.786
nos
Nitric-oxide synthase, oxygenase subunit; Family membership.
  
  
 0.764
nasD
Nitrite reductase (NAD(P)H).
 
  
 0.758
sce7690
Hypothetical protein.
  
     0.743
sce3022
Hypothetical protein.
  
    0.722
sce4535
Hypothetical protein predicted by Glimmer/Critica.
  
     0.694
sce0703
Hypothetical protein.
  
    0.691
gltB1
Glutamate synthase (NADPH); High confidence in function and specificity.
  
 
 0.675
sce2840
Hypothetical protein; COG: ATP-dependent nuclease, subunit B.
  
     0.673
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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