Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sce1313Putative carbonate hydratase; Family membership. (167 aa)    
Predicted Functional Partners:
sce4632
Putative carbonate hydratase; Family membership.
     
  0.900
cynT
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
     
  0.900
sce5269
Hypothetical protein; COG: Carbonic anhydrases/acetyltransferases,isoleucine patch superfamily.
    
 
 0.757
apt
Putative Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.643
geoA
Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP).
  
     0.578
sce2065
Hypothetical protein.
  
     0.574
sce6369
Putative Pentalenene synthase.
  
     0.573
sce4789
Hypothetical protein; Family membership; Belongs to the UPF0753 family.
  
    0.565
sce8745
Hypothetical protein; Family membership; Belongs to the UPF0753 family.
  
    0.565
sce1312
Hypothetical protein.
       0.518
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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