Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce1363Hypothetical protein. (356 aa)    
Predicted Functional Partners:
sce3373
Hypothetical protein; Family membership.
  
     0.647
sce2039
Glutamyl endopeptidase; Family membership; Belongs to the peptidase S1B family.
  
     0.631
sce8208
CDP-diacylglycerol--serine O-phosphatidyltransferase.
  
     0.618
sce5494
Hypothetical protein.
  
     0.611
sce1510
Putative transposase; Family membership.
  
     0.562
sce4975
Putative secreted protein.
  
     0.557
sce4561
Unknown protein.
  
     0.554
sce0462
Hypothetical protein; Restriction endonuclease.
  
     0.550
sce1319
Hypothetical protein.
  
     0.540
dinP
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
   
   0.533
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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