STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dsbADSBA oxidoreductase; Family membership. (236 aa)    
Predicted Functional Partners:
sce1375
Predicted GTPase; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.678
sce4972
Globin-like protein; Family membership.
  
  
 0.674
arsC1
Possible arsenate reductase; Belongs to the ArsC family.
    
 
 0.645
sce6040
ArsC family protein; Family membership; Belongs to the ArsC family.
    
 
 0.645
ssuE
FMN reductase; High confidence in function and specificity.
 
    0.558
msrA2
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.497
sce1514
Predicted flavoprotein.
  
    0.494
sce1880
Putative reductase; Family membership.
  
    0.494
sce8838
Putative [Acyl-carrier-protein] phosphodiesterase; Family membership.
  
    0.494
sce0497
Putative homocysteine S-methyltransferase family protein.
   
    0.406
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.