STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce1422Probable multidrug efflux membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1077 aa)    
Predicted Functional Partners:
sce1421
MFP family efflux transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.987
mdtA2
Multidrug resistance protein; Specificity unclear; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.805
czcB1
Heavy metal efflux pump, CzcB family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.759
sce5285
Putative multidrug resistance protein precursor; Family membership; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.741
sce8112
Putative secreted protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.704
czcB2
Heavy metal efflux pump, CzcB family; High confidence in function and specificity; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.702
sce8096
Putative cation efflux system transmembrane protein; Specificity unclear; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.654
arcA
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
 0.651
sce1627
RND family efflux transporter; Specificity unclear; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.647
sce1423
Transcriptional regulator, LysR family; Family membership; Belongs to the LysR transcriptional regulatory family.
 
     0.614
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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