Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| geoA | sce1440 | sce8552 | sce1440 | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | Putative terpene cyclase; Family membership. | 0.445 |
| geoA | sce1441 | sce8552 | sce1441 | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | Putative nucleotide-binding protein; Family membership. | 0.482 |
| geoA | sce1442 | sce8552 | sce1442 | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | Putative nucleotide-binding protein. | 0.465 |
| geoA | sce3804 | sce8552 | sce3804 | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | Putative ATP/GTP-binding protein. | 0.474 |
| sce1440 | geoA | sce1440 | sce8552 | Putative terpene cyclase; Family membership. | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | 0.445 |
| sce1440 | sce1441 | sce1440 | sce1441 | Putative terpene cyclase; Family membership. | Putative nucleotide-binding protein; Family membership. | 0.936 |
| sce1440 | sce1442 | sce1440 | sce1442 | Putative terpene cyclase; Family membership. | Putative nucleotide-binding protein. | 0.887 |
| sce1440 | sce1443 | sce1440 | sce1443 | Putative terpene cyclase; Family membership. | Hypothetical membrane channel protein. | 0.479 |
| sce1440 | sce1445 | sce1440 | sce1445 | Putative terpene cyclase; Family membership. | Hypothetical protein. | 0.636 |
| sce1440 | sce2242 | sce1440 | sce2242 | Putative terpene cyclase; Family membership. | Putative hydrolase. | 0.665 |
| sce1440 | sce3210 | sce1440 | sce3210 | Putative terpene cyclase; Family membership. | Hypothetical WD-repeat protein all2124. | 0.462 |
| sce1440 | sce3804 | sce1440 | sce3804 | Putative terpene cyclase; Family membership. | Putative ATP/GTP-binding protein. | 0.603 |
| sce1440 | sce4006 | sce1440 | sce4006 | Putative terpene cyclase; Family membership. | Bacterial type 3a, cellulose-binding domain; Family membership. | 0.611 |
| sce1441 | geoA | sce1441 | sce8552 | Putative nucleotide-binding protein; Family membership. | Putative terpene cyclase; Catalyzes the conversion of (2E,6E)-farnesyl diphosphate (FPP) to yield the bicyclic sesquiterpene eremophilene via a 1,10- cyclization, which requires the abstraction of the pyrophosphate from FPP to yield the (E,E)-germacradienyl cation. The only accepted substrate is farnesyl diphosphate (FPP). | 0.482 |
| sce1441 | sce1440 | sce1441 | sce1440 | Putative nucleotide-binding protein; Family membership. | Putative terpene cyclase; Family membership. | 0.936 |
| sce1441 | sce1442 | sce1441 | sce1442 | Putative nucleotide-binding protein; Family membership. | Putative nucleotide-binding protein. | 0.550 |
| sce1441 | sce1443 | sce1441 | sce1443 | Putative nucleotide-binding protein; Family membership. | Hypothetical membrane channel protein. | 0.526 |
| sce1441 | sce1445 | sce1441 | sce1445 | Putative nucleotide-binding protein; Family membership. | Hypothetical protein. | 0.568 |
| sce1441 | sce2242 | sce1441 | sce2242 | Putative nucleotide-binding protein; Family membership. | Putative hydrolase. | 0.543 |
| sce1441 | sce3210 | sce1441 | sce3210 | Putative nucleotide-binding protein; Family membership. | Hypothetical WD-repeat protein all2124. | 0.473 |
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