STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce1467Putative Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; Family membership. (557 aa)    
Predicted Functional Partners:
sce8261
Polyketide synthase type I; Family membership.
 0.991
sce8255
Non-ribosomal peptide synthetase; Family membership.
  
 0.979
sce0436
AMP-dependent synthetase and ligase.
 
     0.972
mxcG
Nonribosomal peptide synthetase; High confidence in function and specificity.
 
 0.957
sce0345
NRPS/PKS hybrid; Family membership.
 0.948
sce3190
Polyketide synthase; Family membership.
 0.934
sce6823
NRPS/PKS hybrid.
0.912
sce3192
Polyketide synthase; Family membership.
 0.903
sce8257
Non-ribosomal peptide synthetase; Family membership.
  
0.877
acpP1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
   0.837
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.