STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce1498Putative Endoglucanase A, secreted; Family membership. (596 aa)    
Predicted Functional Partners:
sce1500
Hypothetical protein-signal peptide.
 
     0.667
sce1499
Putative secreted protein.
       0.636
sce4015
Hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
 
     0.620
galA
Arabinogalactan endo-1,4-beta-galactosidase; High confidence in function and specificity.
  
     0.593
sce5436
Hypothetical protein predicted by Glimmer/Critica.
  
     0.589
sce4860
Hypothetical protein.
  
   
 0.586
sce6377
Hypothetical protein; Belongs to the glycosyl hydrolase 28 family.
   
 
 0.564
sce4005
Glycosyl hydrolases family 11 member; Family membership; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.560
sce0998
Hypothetical protein predicted by Glimmer/Critica.
 
     0.552
sce2175
PE_PGRS family protein.
  
  
 0.542
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.