Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce1529Uncharacterized conserved protein contains double-stranded beta-helix domain. (145 aa)    
Predicted Functional Partners:
sce5373
NAD(P)-bd_dom domain-containing protein; Unnamed protein product; Family membership.
 
     0.747
gst5
Gst5 protein; Glutathione S-transferase.
       0.732
sce0980
Putative transcriptional regulator.
  
  
 0.539
sce1531
Leucine-rich repeat (LRR) protein.
       0.508
sce1532
Hypothetical protein predicted by Glimmer/Critica.
       0.473
sce7336
Hypothetical protein predicted by Glimmer/Critica.
  
     0.448
sce1533
Put. membrane protein.
       0.446
gcd
Glucose 1-dehydrogenase; Family membership.
       0.424
sce1128
Hypothetical protein predicted by Glimmer/Critica.
  
     0.419
sce4230
Putative membrane protein.
 
     0.404
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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