Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce1772Uncharacterized conserved protein involved in stress response; Function unclear; Belongs to the UPF0229 family. (405 aa)    
Predicted Functional Partners:
spoVR
Stage V sporulation protein R; High confidence in function and specificity.
 
  
 0.995
prkA1
Protein kinase; Family membership.
 
  
 0.975
prkA2
Protein kinase; Family membership.
  
 0.975
sce1771
Keratin associated protein 5-4; Function unclear.
       0.560
phoH1
PhoH family protein; High confidence in function and specificity.
   
    0.548
otsA
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); High confidence in function and specificity.
   
    0.545
sce3268
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Family membership.
   
    0.545
sce6206
Glutamate/leucine/phenylalanine/valine dehydrogenase; Family membership; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
    0.536
dkgB
Putative 2,5-didehydrogluconate reductase; Family membership.
   
    0.507
sce0299
LysM domain-containing protein; Unnamed protein product; Function unclear.
  
    0.477
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.