STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce1823Hypothetical protein predicted by Glimmer/Critica. (136 aa)    
Predicted Functional Partners:
napB
Diheme cytochrome C precursor; Family membership.
  
  
 0.858
sce7291
Hypothetical protein predicted by Glimmer/Critica.
  
 
 0.795
napG
Putative ferredoxin; Family membership.
  
 
 0.771
sce4516
Putative oxidoreductase, iron-sulfur binding; Family membership.
  
 
 0.756
hmoA
Molybdopterin oxidoreductase, iron-sulfur binding subunit.
  
 
 0.756
nrfA
Nitrite reductase (cytochrome; Family membership; Belongs to the cytochrome c-552 family.
  
 
 0.631
sce2903
Cytochrome c family protein.
  
 
 0.631
sce3157
Molybdopterin-containing oxidoreductase catalytic subunit; Family membership; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.543
napA
Nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.543
narB3
Nitrate reductase; Family membership; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.543
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.