STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce1882Putative secreted hydrolase. (323 aa)    
Predicted Functional Partners:
sce3646
AB hydrolase-1 domain-containing protein; Unnamed protein product; Family membership.
  
     0.757
sce1883
Hypothetical protein predicted by Glimmer/Critica.
       0.746
sce1012
Putative hydrolase; Family membership.
  
     0.739
sce4000
Putative hydrolase; Family membership.
  
     0.699
sce0598
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Family membership.
  
     0.696
sce1458
Probable 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase; Function unclear.
  
     0.663
sce6663
Putative hydrolase.
  
   
 0.642
sce3513
Putative hydrolase; Family membership.
  
     0.631
sce3492
Epoxide hydrolase.
  
     0.629
sce5010
Putative hydrolase; Family membership.
  
   
 0.515
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.