STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce1885Uncharacterized protein conserved in bacteria. (495 aa)    
Predicted Functional Partners:
sce3434
Hypothetical protein.
  
 0.916
sce1887
Hypothetical protein predicted by Glimmer/Critica.
       0.780
sce1886
Hypothetical protein predicted by Glimmer/Critica.
       0.773
sce6053
Uncharacterized protein conserved in bacteria.
  
 0.749
sce1888
Hypothetical protein predicted by Glimmer/Critica.
       0.741
sce1869
Predicted membrane protein.
 
  
 0.532
sce1889
Hypothetical protein.
       0.529
sce7866
Hypothetical protein predicted by Glimmer/Critica; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
   
  
 0.510
sce1884
Hypothetical protein; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases large terminal subunit.
       0.493
sce2395
Putative cation-transporting ATPase; Family membership.
   
    0.430
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.