Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce1919Possible carboxylesterase; Family membership. (333 aa)    
Predicted Functional Partners:
nuoF
NADH dehydrogenase (ubiquinone); High confidence in function and specificity.
   
 
 0.826
nuoE
NADH dehydrogenase (ubiquinone); High confidence in function and specificity.
   
   0.793
sce1918
Hypothetical protein predicted by Glimmer/Critica.
       0.773
nuoG
NADH dehydrogenase (ubiquinone); Family membership.
   
 
 0.756
sce5452
Conserved hypothetical protein with a signal peptide.
  
     0.749
sce6526
Hypothetical protein.
  
     0.749
sce8912
Transcriptional regulator, AraC family; Family membership.
  
     0.746
sce7079
Hypothetical protein.
  
     0.744
sce3343
Hypothetical protein AQ_1349.
  
     0.741
nodD
Nodulation protein D 1; Family membership.
  
     0.694
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.