Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| gltB1 | rpoN | sce5060 | sce0033 | Glutamate synthase (NADPH); High confidence in function and specificity. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.491 |
| gltB1 | sce1494 | sce5060 | sce1494 | Glutamate synthase (NADPH); High confidence in function and specificity. | Protein kinase; Family membership. | 0.461 |
| gltB1 | sce1948 | sce5060 | sce1948 | Glutamate synthase (NADPH); High confidence in function and specificity. | Unnamed protein product; Family membership. | 0.441 |
| gltB1 | sce5444 | sce5060 | sce5444 | Glutamate synthase (NADPH); High confidence in function and specificity. | Protein kinase; Family membership. | 0.461 |
| rpoN | gltB1 | sce0033 | sce5060 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Glutamate synthase (NADPH); High confidence in function and specificity. | 0.491 |
| rpoN | sce0307 | sce0033 | sce0307 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Protein kinase; Family membership. | 0.671 |
| rpoN | sce0439 | sce0033 | sce0439 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator; Family membership. | 0.727 |
| rpoN | sce1948 | sce0033 | sce1948 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Unnamed protein product; Family membership. | 0.770 |
| rpoN | sce2927 | sce0033 | sce2927 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sigma-54 factor interaction domain-containing protein; Unnamed protein product; Family membership. | 0.565 |
| rpoN | sce4161 | sce0033 | sce4161 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator; Family membership. | 0.731 |
| sce0307 | rpoN | sce0307 | sce0033 | Protein kinase; Family membership. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.671 |
| sce0307 | sce1948 | sce0307 | sce1948 | Protein kinase; Family membership. | Unnamed protein product; Family membership. | 0.440 |
| sce0307 | sce2927 | sce0307 | sce2927 | Protein kinase; Family membership. | Sigma-54 factor interaction domain-containing protein; Unnamed protein product; Family membership. | 0.745 |
| sce0439 | rpoN | sce0439 | sce0033 | Transcriptional regulator; Family membership. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.727 |
| sce0439 | sce1948 | sce0439 | sce1948 | Transcriptional regulator; Family membership. | Unnamed protein product; Family membership. | 0.927 |
| sce0439 | sce4161 | sce0439 | sce4161 | Transcriptional regulator; Family membership. | Transcriptional regulator; Family membership. | 0.907 |
| sce1494 | gltB1 | sce1494 | sce5060 | Protein kinase; Family membership. | Glutamate synthase (NADPH); High confidence in function and specificity. | 0.461 |
| sce1494 | sce1948 | sce1494 | sce1948 | Protein kinase; Family membership. | Unnamed protein product; Family membership. | 0.418 |
| sce1494 | sce5444 | sce1494 | sce5444 | Protein kinase; Family membership. | Protein kinase; Family membership. | 0.773 |
| sce1494 | sce7701 | sce1494 | sce7701 | Protein kinase; Family membership. | Protein kinase; Family membership. | 0.641 |
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