STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce2000Translation initiation inhibitor. (141 aa)    
Predicted Functional Partners:
sce2001
Putative 3-oxoacyl-[acyl-carrier-protein] reductase.
 
     0.823
sce1999
Transcriptional regulator, MarR family; Family membership.
 
     0.822
sce8661
Probable oxidoreductase; Family membership.
 
  
 0.777
sce1998
Enoyl-CoA hydratase.
 
     0.740
sce1997
Putative Acyl-CoA dehydrogenase.
 
 
   0.731
sce1996
NADH:flavin oxidoreductase / NADH oxidase family protein; Family membership.
 
   
 0.642
sce1995
acyl-CoA synthetase; Family membership.
 
     0.631
sce1994
Hypothetical protein.
       0.574
nnrE
ADP-dependent (S)-NAD(P)H-hydrate dehydratase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to all [...]
  
  
 0.467
fcbC
4-hydroxybenzoyl-CoA thioesterase; Family membership.
 
     0.419
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.