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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce2001Putative 3-oxoacyl-[acyl-carrier-protein] reductase. (253 aa)    
Predicted Functional Partners:
sce2024
Hydroxysteroid (17-beta) dehydrogenase 4.
 
 0.915
sce0820
Polyketide synthase; Family membership; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.912
scoB
3-oxoacid CoA-transferase.
 
 0.910
scoA
3-oxoacid CoA-transferase.
   
 0.906
mvaB
Hydroxymethylglutaryl-CoA lyase.
   
 
  0.901
omt
O-methyltransferase; Specificity unclear.
 
  
   0.867
sce2000
Translation initiation inhibitor.
 
     0.823
sce3451
Dehydrogenase; Family membership.
  
     0.751
sce1999
Transcriptional regulator, MarR family; Family membership.
 
     0.730
sce1998
Enoyl-CoA hydratase.
 
 0.699
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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