STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce2064Asparagine synthetase; Family membership. (668 aa)    
Predicted Functional Partners:
asnB3
AsnB3 protein; Family membership.
  
  
 
0.929
asnH
AsnH protein; High confidence in function and specificity.
  
  
 
0.924
asnB1
Asparagine synthetase; High confidence in function and specificity.
  
  
 
0.923
asnB2
AsnB2 protein; High confidence in function and specificity.
  
  
 
0.923
pyrB
Aspartate carbamoyltransferase; Family membership; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.916
argG
Argininosuccinate synthase; High confidence in function and specificity; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
   
 0.916
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
 
 0.914
ansB
L-asparaginase; Family membership.
     
 0.912
sce3033
Unnamed protein product; Family membership.
     
 0.905
sce3769
Putative L-asparaginase; Family membership.
     
 0.905
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.