STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce2073Putative membrane protein. (1203 aa)    
Predicted Functional Partners:
sce9151
Guanylate cyclase; Family membership.
 
 
 0.791
sce7196
cAMP binding protein.
 
     0.772
sce2934
Protein kinase; Family membership.
 
 
 0.771
sce1676
Cyclic nucleotide binding protein.
 
     0.758
sce1501
Putative adenylate/guanylate cyclase.
 
 
  0.745
sce2046
Hypothetical protein.
  
     0.736
sce7132
Putative membrane protein.
  
     0.725
sce0958
Hypothetical protein predicted by Glimmer/Critica.
 
     0.723
sce2730
Protein kinase; Family membership.
 
 
 0.720
sce7616
Adenylate cyclase; Family membership.
 
 
 0.717
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.