STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce2143Uncharacterized protein conserved in cyanobacteria. (186 aa)    
Predicted Functional Partners:
sce4876
Hypothetical protein.
  
     0.621
sce0956
Hypothetical protein.
  
     0.477
sce4360
Protein of unknown function.
  
     0.454
sce5012
Hypothetical protein.
  
     0.451
sce2139
Hypothetical protein.
       0.449
sce2140
Putative secreted protein.
       0.449
sce2141
Putative membrane protein; Function unclear.
       0.449
sce2142
ABC transporter, periplasmic-substrate binding protein, putative; Family membership.
       0.449
sce1131
Predicted nucleic acid-binding protein contains PIN domain.
  
     0.440
sce2144
Uncharacterized protein conserved in cyanobacteria.
  
     0.438
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.