Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cheA2 | cheB | sce1226 | sce1599 | Chemotaxis protein CheA. | Putative Chemotaxis response regulator CheB type; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.979 |
cheA2 | cheD | sce1226 | sce2204 | Chemotaxis protein CheA. | Putative chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.922 |
cheA2 | cheR4 | sce1226 | sce2662 | Chemotaxis protein CheA. | Chemotaxis response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.980 |
cheA2 | cheW5 | sce1226 | sce2201 | Chemotaxis protein CheA. | Chemotaxis protein. | 0.988 |
cheA2 | mcp | sce1226 | sce2202 | Chemotaxis protein CheA. | Putative methyl-accepting chemotaxis protein. | 0.981 |
cheA2 | sce0777 | sce1226 | sce0777 | Chemotaxis protein CheA. | CheA-like hybrid histidine kinase; Family membership. | 0.488 |
cheA2 | sce1730 | sce1226 | sce1730 | Chemotaxis protein CheA. | Hypothetical protein; Family membership. | 0.979 |
cheA2 | sce4190 | sce1226 | sce4190 | Chemotaxis protein CheA. | Uncharacterized protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
cheA3 | cheB | sce1594 | sce1599 | Chemotaxis sensor histidine kinase CheA; High confidence in function and specificity. | Putative Chemotaxis response regulator CheB type; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.988 |
cheA3 | cheD | sce1594 | sce2204 | Chemotaxis sensor histidine kinase CheA; High confidence in function and specificity. | Putative chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.923 |
cheA3 | cheR4 | sce1594 | sce2662 | Chemotaxis sensor histidine kinase CheA; High confidence in function and specificity. | Chemotaxis response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.980 |
cheA3 | cheW5 | sce1594 | sce2201 | Chemotaxis sensor histidine kinase CheA; High confidence in function and specificity. | Chemotaxis protein. | 0.988 |
cheA3 | mcp | sce1594 | sce2202 | Chemotaxis sensor histidine kinase CheA; High confidence in function and specificity. | Putative methyl-accepting chemotaxis protein. | 0.981 |
cheA3 | sce0777 | sce1594 | sce0777 | Chemotaxis sensor histidine kinase CheA; High confidence in function and specificity. | CheA-like hybrid histidine kinase; Family membership. | 0.493 |
cheA3 | sce1730 | sce1594 | sce1730 | Chemotaxis sensor histidine kinase CheA; High confidence in function and specificity. | Hypothetical protein; Family membership. | 0.980 |
cheA3 | sce4190 | sce1594 | sce4190 | Chemotaxis sensor histidine kinase CheA; High confidence in function and specificity. | Uncharacterized protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
cheA4 | cheB | sce2203 | sce1599 | Putative chemotaxis protein CheA. | Putative Chemotaxis response regulator CheB type; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.979 |
cheA4 | cheD | sce2203 | sce2204 | Putative chemotaxis protein CheA. | Putative chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.981 |
cheA4 | cheR4 | sce2203 | sce2662 | Putative chemotaxis protein CheA. | Chemotaxis response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.980 |
cheA4 | cheW5 | sce2203 | sce2201 | Putative chemotaxis protein CheA. | Chemotaxis protein. | 0.997 |
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