Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gst8Putative glutathione-S-transferase; High confidence in function and specificity. (234 aa)    
Predicted Functional Partners:
sce2210
Putative pyrazinamidase/nicotinamidase.
 
  
 0.884
gst2
Gst2 protein; Glutathione S-transferase.
  
     0.728
sce0601
Probable glutathione S-transferase; Family membership.
  
     0.634
gst15
Gst15 protein; High confidence in function and specificity; Belongs to the GST superfamily.
  
     0.601
sce0496
Putative glutathione transferase; Family membership; Belongs to the GST superfamily.
 
   
 0.516
sce2207
Slit homolog 3 protein precursor (Slit-3).
 
     0.495
sce8129
Putative secreted protein.
  
     0.493
sce2208
Hypothetical protein predicted by Glimmer/Critica.
       0.409
sce2209
Transposon Ty1 protein B.
       0.409
sce7924
Glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
 
 
   0.406
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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