Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ctaA | sce2254 | sce2846 | sce2254 | Cytochrome aa3 controlling protein. | Hypothetical protein. | 0.424 |
| ctaA | sce6491 | sce2846 | sce6491 | Cytochrome aa3 controlling protein. | moaA/nifB/pqqE family protein. | 0.415 |
| sce2254 | ctaA | sce2254 | sce2846 | Hypothetical protein. | Cytochrome aa3 controlling protein. | 0.424 |
| sce2254 | sce2255 | sce2254 | sce2255 | Hypothetical protein. | Hypothetical protein. | 0.787 |
| sce2254 | sce2256 | sce2254 | sce2256 | Hypothetical protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.406 |
| sce2254 | sce2340 | sce2254 | sce2340 | Hypothetical protein. | Transcriptional regulator, ArsR family; Family membership. | 0.409 |
| sce2254 | sce2341 | sce2254 | sce2341 | Hypothetical protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.403 |
| sce2254 | sce3586 | sce2254 | sce3586 | Hypothetical protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.678 |
| sce2254 | sce6491 | sce2254 | sce6491 | Hypothetical protein. | moaA/nifB/pqqE family protein. | 0.408 |
| sce2254 | sce7101 | sce2254 | sce7101 | Hypothetical protein. | Uncharacterized protein conserved in bacteria. | 0.836 |
| sce2254 | sce8946 | sce2254 | sce8946 | Hypothetical protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.460 |
| sce2254 | yafJ | sce2254 | sce2253 | Hypothetical protein. | Putative amidotransferase; Family membership. | 0.773 |
| sce2255 | sce2254 | sce2255 | sce2254 | Hypothetical protein. | Hypothetical protein. | 0.787 |
| sce2255 | sce2256 | sce2255 | sce2256 | Hypothetical protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.406 |
| sce2255 | yafJ | sce2255 | sce2253 | Hypothetical protein. | Putative amidotransferase; Family membership. | 0.781 |
| sce2256 | sce2254 | sce2256 | sce2254 | Hypothetical protein predicted by Glimmer/Critica. | Hypothetical protein. | 0.406 |
| sce2256 | sce2255 | sce2256 | sce2255 | Hypothetical protein predicted by Glimmer/Critica. | Hypothetical protein. | 0.406 |
| sce2256 | yafJ | sce2256 | sce2253 | Hypothetical protein predicted by Glimmer/Critica. | Putative amidotransferase; Family membership. | 0.406 |
| sce2340 | sce2254 | sce2340 | sce2254 | Transcriptional regulator, ArsR family; Family membership. | Hypothetical protein. | 0.409 |
| sce2340 | sce2341 | sce2340 | sce2341 | Transcriptional regulator, ArsR family; Family membership. | Hypothetical protein predicted by Glimmer/Critica. | 0.950 |
page 1 of 2