Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce2259Hypothetical protein; Family membership. (382 aa)    
Predicted Functional Partners:
sce6681
Glycosyltransferase; Specificity unclear; Belongs to the glycosyltransferase 26 family.
   
 0.958
sce2260
Putative secreted protein; Family membership.
       0.751
sce8918
Glycosyltransferase; Specificity unclear.
 
  
 0.675
sce7324
Glycosyltransferase; Specificity unclear.
 
   
 0.607
wzc2
Protein tyrosine kinase.
  
  
 0.578
sce2603
Hypothetical protein predicted by Glimmer/Critica.
  
     0.535
sce4241
Glycosyltransferase; Function unclear.
 
  
 0.444
glgA3
Glycogen synthase; High confidence in function and specificity.
 
  
 0.415
sce8936
Hypothetical protein; Fe-S oxidoreductase.
 
     0.400
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.