STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce2326Protein kinase; Family membership. (1340 aa)    
Predicted Functional Partners:
sce5370
Fibronectin type III domain protein.
  
     0.762
sce4752
Protein kinase; Family membership.
  
     0.733
sce4758
Thiol:disulfide interchange protein.
 
     0.702
sce7712
Hypothetical protein; Predicted phosphohydrolases.
  
     0.700
CAN92074.1
Pseudogene.
  
     0.693
cotH
Spore coat protein H; Family membership.
  
     0.641
sce5384
Membrane protease subunits, stomatin/prohibitin homologs.
  
     0.641
sce3419
Outer membrane protein.
  
     0.624
sce7654
Protein kinase; Family membership.
  
     0.606
sce1098
Hypothetical protein predicted by Glimmer/Critica.
  
     0.601
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.