STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce2385Hypothetical protein. (773 aa)    
Predicted Functional Partners:
sce6823
NRPS/PKS hybrid.
  
  
 0.953
sce2387
Non-ribosomal peptide synthetase; Family membership.
  
  
 0.945
sce0345
NRPS/PKS hybrid; Family membership.
  
  
 0.904
sce8255
Non-ribosomal peptide synthetase; Family membership.
 
  
 0.871
mxcF
Isochorismatase; High confidence in function and specificity.
  
  
 0.831
sce2384
Putative hydrolase.
  
    0.776
sce8256
Non-ribosomal peptide synthetase; Family membership.
 
  
 0.740
sce8262
Non-ribosomal peptide synthetase; Family membership.
 
  
 0.739
mxcG
Nonribosomal peptide synthetase; High confidence in function and specificity.
 
  
 0.705
sce2371
Putative secreted protein.
  
  
 0.665
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.