STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce2461Two-component system sensor protein; Family membership. (738 aa)    
Predicted Functional Partners:
sce6014
Response regulator; Family membership.
 
 0.953
sce8107
Unnamed protein product; Family membership.
 
 0.937
sce8721
Unnamed protein product; Hypothetical protein.
 
 0.935
sce6552
Response regulator.
 
 0.934
sce6966
Response regulator; Family membership.
 
 0.933
sce4007
Sigma-54 dependent transcriptional regulator; Family membership.
  
 0.932
sce4405
Unnamed protein product; Family membership.
  
 0.932
sce7217
Unnamed protein product; Family membership.
 
 
 0.919
sce6324
Sigma-54 dependent transcriptional regulator; Family membership.
    
 0.907
glnB
Nitrogen regulatory protein P-II; High confidence in function and specificity; Belongs to the P(II) protein family.
  
 
 0.865
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.