Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ptsNNitrogen regulatory IIA protein. (289 aa)    
Predicted Functional Partners:
sce5768
Nitrogen regulatory IIA protein homolog; Family membership.
  
  
  0.953
sce2508
Putative cation/hydrogen exchanger; Specificity unclear.
 
     0.834
sce5766
Putative P-loop ATPase; Displays ATPase and GTPase activities.
  
  
 0.797
sce5597
Cold shock protein; Family membership.
  
  
 0.701
fruB
Fructose-specific MTP; High confidence in function and specificity; Belongs to the PEP-utilizing enzyme family.
 
  
 0.636
sce0281
Probable signal peptide protein.
  
     0.630
sce0550
Hypothetical protein/Zn-dependent dipeptidase (fragment); Function unclear.
  
     0.611
sce8738
Protein kinase; Family membership.
 
   0.596
sce7451
Protein kinase; Family membership.
 
   0.592
sce9197
Protein kinase.
 
   0.587
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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