STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce2525Highly conserved protein containing a thioredoxin domain. (716 aa)    
Predicted Functional Partners:
celG
Cellulase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.651
celA
CelA protein; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.651
sce4014
Putative secreted protein.
   
 
 0.651
celB
Cellulase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.651
celC
Cellulase; High confidence in function and specificity; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.651
sce6662
Putative secreted protein.
   
 
 0.651
sce2526
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
    0.586
acpM
Acyl carrier protein.
   
   0.516
sce2530
acyl-CoA synthetase; Family membership.
   
   0.515
sce2527
Probable Acyl-[acyl-carrier protein] desaturase; Family membership.
       0.499
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.