Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cfa1Cyclopropane-fatty-acyl-phospholipid synthase; High confidence in function and specificity. (294 aa)    
Predicted Functional Partners:
acpM
Acyl carrier protein.
     
 0.776
sce2527
Probable Acyl-[acyl-carrier protein] desaturase; Family membership.
     
 0.775
sce2530
acyl-CoA synthetase; Family membership.
     
 0.774
sce2526
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.662
sce2525
Highly conserved protein containing a thioredoxin domain.
       0.499
fba2
Fructose-bisphosphate aldolase; Family membership.
   
    0.464
sce6823
NRPS/PKS hybrid.
     
 0.460
sce2387
Non-ribosomal peptide synthetase; Family membership.
     
 0.447
sce0345
NRPS/PKS hybrid; Family membership.
     
 0.425
sce3856
Hypothetical protein; Belongs to the Cob(I)alamin adenosyltransferase family.
   
    0.408
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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