Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce2530acyl-CoA synthetase; Family membership. (607 aa)    
Predicted Functional Partners:
sce8261
Polyketide synthase type I; Family membership.
 0.991
sce3190
Polyketide synthase; Family membership.
 0.955
sce8255
Non-ribosomal peptide synthetase; Family membership.
  
0.946
mxcG
Nonribosomal peptide synthetase; High confidence in function and specificity.
 
0.945
sce0436
AMP-dependent synthetase and ligase.
 
    
0.928
sce3192
Polyketide synthase; Family membership.
 0.916
sce0819
Polyketide synthase; Family membership.
 
 0.855
sce3813
Beta-ketoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
  
 0.830
bioF1
8-amino-7-oxononanoate synthase; Family membership.
 
  
 0.824
acpM
Acyl carrier protein.
  
   0.822
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.