Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| adh2 | cumB | sce2769 | sce2586 | Class III alcohol dehydrogenase; High confidence in function and specificity; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.546 |
| birA | cumB | sce2576 | sce2586 | Biotin-(acetyl-CoA-carboxylase) ligase; Family membership. | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.591 |
| cafA | cumB | sce7264 | sce2586 | Ribonuclease G; Family membership. | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.503 |
| cafA | sun | sce7264 | sce7889 | Ribonuclease G; Family membership. | Sun protein; Family membership; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.422 |
| cumB | adh2 | sce2586 | sce2769 | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Class III alcohol dehydrogenase; High confidence in function and specificity; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. | 0.546 |
| cumB | birA | sce2586 | sce2576 | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Biotin-(acetyl-CoA-carboxylase) ligase; Family membership. | 0.591 |
| cumB | cafA | sce2586 | sce7264 | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Ribonuclease G; Family membership. | 0.503 |
| cumB | glxK | sce2586 | sce3558 | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | GlxK protein; High confidence in function and specificity; Belongs to the glycerate kinase type-1 family. | 0.901 |
| cumB | hisIE | sce2586 | sce0397 | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Histidine biosynthesis bifunctional protein HisIE; Family membership; In the N-terminal section; belongs to the PRA-CH family. | 0.852 |
| cumB | phoH2 | sce2586 | sce7965 | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | PhoH family protein; Family membership. | 0.531 |
| cumB | sce8634 | sce2586 | sce8634 | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Methylenetetrahydrofolate reductase family protein; Family membership. | 0.503 |
| cumB | sun | sce2586 | sce7889 | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Sun protein; Family membership; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.527 |
| cumB | truA | sce2586 | sce8062 | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.510 |
| cumB | ung | sce2586 | sce4747 | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.791 |
| glxK | cumB | sce3558 | sce2586 | GlxK protein; High confidence in function and specificity; Belongs to the glycerate kinase type-1 family. | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.901 |
| hisIE | cumB | sce0397 | sce2586 | Histidine biosynthesis bifunctional protein HisIE; Family membership; In the N-terminal section; belongs to the PRA-CH family. | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.852 |
| hisIE | sce8634 | sce0397 | sce8634 | Histidine biosynthesis bifunctional protein HisIE; Family membership; In the N-terminal section; belongs to the PRA-CH family. | Methylenetetrahydrofolate reductase family protein; Family membership. | 0.760 |
| phoH2 | cumB | sce7965 | sce2586 | PhoH family protein; Family membership. | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.531 |
| phoH2 | sun | sce7965 | sce7889 | PhoH family protein; Family membership. | Sun protein; Family membership; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.599 |
| sce8634 | cumB | sce8634 | sce2586 | Methylenetetrahydrofolate reductase family protein; Family membership. | Putative zinc-binding hydrolase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.503 |
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