STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce2589Probable Acetyl-CoA carboxylase; Family membership. (510 aa)    
Predicted Functional Partners:
accC2
Biotin carboxylase subunit of acetyl-CoA carboxylase; Family membership.
 
 0.992
sce3699
Hypothetical protein; Acetyl/propionyl-CoA carboxylase alpha subunit.
 
 0.942
sce4915
Urea amidolyase-related protein.
 
 0.937
sce8736
Biotin carboxylase related protein; Family membership.
 
 0.932
accC1
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.917
sce3291
Biotin/lipoyl attachment domain; Family membership.
  
 0.882
mvaB
Hydroxymethylglutaryl-CoA lyase.
 
 0.870
birA
Biotin-(acetyl-CoA-carboxylase) ligase; Family membership.
 
 
 0.867
epi
Methylmalonyl-CoA epimerase; High confidence in function and specificity.
 
  
 0.749
sce2588
Hypothetical protein; Function unclear.
       0.727
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.