Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce2630Hypothetical protein. (147 aa)    
Predicted Functional Partners:
sce2347
Hypothetical protein predicted by Glimmer/Critica.
    
 0.667
sce7792
Uncharacterized protein involved in ubiquinone biosynthesis.
    
 0.667
sce9226
Hypothetical protein predicted by Glimmer/Critica.
    
 0.667
sce6411
Hypothetical protein; Fe-S oxidoreductase.
 
     0.636
sce8366
Hypothetical protein predicted by Glimmer/Critica.
  
     0.632
sce3086
Uncharacterized protein conserved in cyanobacteria.
  
     0.593
sce2332
Hypothetical protein.
  
     0.589
sce2629
Putative secreted protein.
       0.588
sce3540
Uncharacterized protein conserved in cyanobacteria.
  
     0.575
sce2078
Probable Lactoylglutathione lyase and related lyases; Family membership.
  
    0.572
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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