Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce2650Hypothetical protein; Membrane-associated phospholipid phosphatase. (352 aa)    
Predicted Functional Partners:
sce2531
Putative secreted protein.
  
     0.735
sce0423
Putative membrane protein.
 
    0.728
sce6508
Putative membrane protein.
  
     0.717
sce6507
Hypothetical protein.
 
     0.697
sce5804
Putative outer membrane protein; Family membership.
  
     0.694
sce1107
Hypothetical protein.
 
     0.692
sce6503
Haloperoxidase-domain containing protein.
 
     0.678
gspL
Putative general secretion pathway protein L; Family membership.
  
     0.673
sce7413
Putative membrane protein.
  
     0.667
sce1105
Putative exported protein.
  
     0.666
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.