ku protein (Sorangium cellulosum So ce56) - STRING interaction network

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[Homology]

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ku

Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. (320 aa)

Predicted Functional Partners:

sce3523

0.979

ligB

0.852

topI

0.653

sce2663

0.570

sce1115

0.568

sce2665

0.486

sce5733

0.482

sce0289

0.419

katE

0.405

Your Current Organism:

Sorangium cellulosum So ce56

NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
katE	ku	sce2114	sce2664	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.405
katE	sce0289	sce2114	sce0289	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	Putative Oxidoreductase.	0.570
katE	sce3523	sce2114	sce3523	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	DNA_LIGASE_A3 domain-containing protein; Unnamed protein product; High confidence in function and specificity.	0.548
ku	katE	sce2664	sce2114	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	0.405
ku	ligB	sce2664	sce6857	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.	0.852
ku	sce0289	sce2664	sce0289	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	Putative Oxidoreductase.	0.419
ku	sce1115	sce2664	sce1115	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	Predicted membrane protein.	0.568
ku	sce2663	sce2664	sce2663	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	Hypothetical protein predicted by Glimmer/Critica.	0.570
ku	sce2665	sce2664	sce2665	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	Isochorismatase; Family membership.	0.486
ku	sce3523	sce2664	sce3523	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	DNA_LIGASE_A3 domain-containing protein; Unnamed protein product; High confidence in function and specificity.	0.979
ku	sce5733	sce2664	sce5733	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	Hypothetical protein.	0.482
ku	topI	sce2664	sce1161	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	DNA topoisomerase, type I, putative; High confidence in function and specificity.	0.653
ligB	ku	sce6857	sce2664	DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.852
ligB	sce3523	sce6857	sce3523	DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.	DNA_LIGASE_A3 domain-containing protein; Unnamed protein product; High confidence in function and specificity.	0.472
ligB	sce5733	sce6857	sce5733	DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.	Hypothetical protein.	0.557
ligB	topI	sce6857	sce1161	DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.	DNA topoisomerase, type I, putative; High confidence in function and specificity.	0.650
sce0289	katE	sce0289	sce2114	Putative Oxidoreductase.	Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.	0.570
sce0289	ku	sce0289	sce2664	Putative Oxidoreductase.	Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.419
sce0289	sce3523	sce0289	sce3523	Putative Oxidoreductase.	DNA_LIGASE_A3 domain-containing protein; Unnamed protein product; High confidence in function and specificity.	0.479
sce0289	topI	sce0289	sce1161	Putative Oxidoreductase.	DNA topoisomerase, type I, putative; High confidence in function and specificity.	0.452

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