STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce2735Hypothetical protein predicted by Glimmer/Critica. (167 aa)    
Predicted Functional Partners:
czcA1
Cobalt/zinc/cadmium efflux RND transporter,permease protein, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.811
czcB1
Heavy metal efflux pump, CzcB family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
      
0.786
tlpA
Thiol:disulfide interchange protein tlpA; Family membership.
   
   0.768
sce2733
Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Family membership.
       0.535
ubiE2
Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; High confidence in function and specificity.
       0.535
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.