STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
czcB1Heavy metal efflux pump, CzcB family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (454 aa)    
Predicted Functional Partners:
czcA1
Cobalt/zinc/cadmium efflux RND transporter,permease protein, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.960
czcA2
RND divalent metal cation efflux transporter CzcA; High confidence in function and specificity; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.842
sce8113
Cation efflux system protein; Specificity unclear; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.835
sce8095
Probable cation efflux system transmembrane protein; Specificity unclear; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.832
sce5284
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.812
acrB
Probable membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.811
sce1628
RND family efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.807
nolG
AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.803
sce2735
Hypothetical protein predicted by Glimmer/Critica.
      
0.791
tlpA
Thiol:disulfide interchange protein tlpA; Family membership.
   
   0.787
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.