Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
sce2779mutT/nudix family protein. (236 aa)    
Predicted Functional Partners:
sce3181
Probable Hydroxymethylglutaryl-CoA synthase.
  
  
 0.763
sce6394
Putative Hydroxymethylglutaryl-CoA synthase.
  
  
 0.763
sce4206
Diphosphomevalonate decarboxylase; Family membership.
  
  
 0.721
crtZ
Beta-carotene hydroxylase; Family membership.
 
  
 0.652
sce3010
Putative 3-hydroxy-3-methylglutaryl-CoA reductase; Family membership; Belongs to the HMG-CoA reductase family.
  
  
 0.624
sce2370
Hypothetical protein; Sterol desaturase.
 
  
 0.514
sce0430
Unnamed protein product.
  
  
 0.487
crtB
Phytoene synthase; Family membership.
  
  
 0.487
cadA
FAD-binding monooxygenase, PheA/TfdB family; Family membership.
  
  
 0.485
sce8661
Probable oxidoreductase; Family membership.
  
  
 0.468
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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