Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sce2797Putative membrane protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (252 aa)    
Predicted Functional Partners:
cinA
Competence-damage inducible protein CinA homolog; High confidence in function and specificity; Belongs to the CinA family.
  
  
 0.851
sce4262
Hypothetical protein.
 
     0.770
sce0208
Hypothetical protein predicted by Glimmer/Critica.
 
     0.769
sce1616
TPR domain protein.
 
 
   0.756
sce6592
Hypothetical protein predicted by Glimmer/Critica.
  
     0.754
sce2920
Tetratricopeptide repeat protein.
  
 
   0.752
sce2515
Hypothetical protein predicted by Glimmer/Critica.
  
    0.750
sce8320
Hypothetical protein; Predicted transcriptional regulators.
  
     0.747
sce0415
Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
     0.744
sce0977
Hypothetical protein; FOG: TPR repeat.
  
 
   0.744
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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