Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce2816Hypothetical protein. (330 aa)    
Predicted Functional Partners:
sce0826
Hypothetical protein.
  
     0.736
sce4041
Hypothetical protein.
  
     0.731
sce3806
Hypothetical protein.
  
     0.728
sce3827
Low-density lipoprotein receptor-related protein.
  
     0.721
sce6217
Hypothetical protein.
  
     0.706
sce6761
Hypothetical protein.
  
     0.696
sce2683
Hypothetical protein.
  
     0.683
sce6213
DUF323 hypothetical protein.
  
     0.678
sce1095
Putative secreted protein.
  
     0.655
sce9290
Hypothetical protein.
  
     0.655
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.